Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7192519_7193150_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7192519 - 7193150

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATTCAG

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

GTAAAAGTAACC

Flanking Amino Acid:

ATTEQEMNDWLSLLNMSCCE

Intron Amino Acid Position:

720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

61.7

44.6

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

85.6

0.8

0.7

84.6

30.4

Minor 5ss

33.2

-1.9

2.8

33.1

41.8

Minor BPS

42.3

-0.6

2.3

55.59

41.6

Associated Gene:

Gene:

TECPR1

Ensembl Gene ID:

ENSAPLG00000005628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032833

7181294 - 7202629

21336

ENSAPLT00000005914

7181294 - 7202629

21336