Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7199750_7200090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7199750 - 7200090

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGACTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TTTTACTCAAGT

Flanking Amino Acid:

RGSVSPKKPAGDCWYHIPSP

Intron Amino Acid Position:

1031

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.8

1.03

0.7

89.6

22.7

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

77.1

0.61

0.8

74.3

35.5

Minor 5ss

32.9

-1.9

2.7

43.2

43.8

Minor BPS

61.3

0.43

85.51

40.5

Associated Gene:

Gene:

TECPR1

Ensembl Gene ID:

ENSAPLG00000005628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005914

7181294 - 7202629

21336

ENSAPLT00000032833

7181294 - 7202629

21336