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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7320741_7321756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7320741 - 7321756

Intron Length:

1016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATACTG

5'SS Class:

major

3'SS Sequence:

CTTTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TCTGCTTGTACT

Flanking Amino Acid:

VYEYQEEELLDKVYSSVLQQ

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

43.4

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

92.3

0.95

0.6

88.4

21.3

Minor 5ss

35.8

-1.6

3.2

45.5

43.5

Minor BPS

50.4

0.09

1.9

72.25

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005209

7318524 - 7335590

17067