Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7326292_7328073_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7326292 - 7328073

Intron Length:

1782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCATAG

5'SS Class:

major

3'SS Sequence:

TTTTTTGCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAG

U12 Branch Point Sequence:

TTTTTCTTGTGT

Flanking Amino Acid:

SLFPRHMEPELAGRDSPIRA

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.2

61.3

40.1

Major BPS

58.2

0.2

1.5

67.3

37.8

Major PPT

90.1

0.9

0.7

28.1

Minor 5ss

48.9

-0.1

2.6

64.3

47.2

Minor BPS

45.5

-0.2

3.6

82.19

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005209

7318524 - 7335590

17067