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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7353916_7354895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7353916 - 7354895

Intron Length:

980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GCAAATCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TCTTTATTAATT

Flanking Amino Acid:

NGFDFVINEDAPVTQRVKLI

Intron Amino Acid Position:

764

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

67.6

0.4

62.1

43.8

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

70.6

0.73

1.5

84.39

36.6

Associated Gene:

Gene:

PMS2

Ensembl Gene ID:

ENSAPLG00000004599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004757

7353225 - 7366237

13013