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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7354997_7355476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7354997 - 7355476

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGCAA

U12 Branch Point Sequence:

AATACTGTATTT

Flanking Amino Acid:

HTVLQGQKLIAPQNLNLTAV

Intron Amino Acid Position:

730

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.3

81.8

38.5

Major BPS

0.2

1.3

69.6

37.5

Major PPT

0.9

0.6

88.4

21.2

Minor 5ss

42.6

-0.8

2.9

41.5

Minor BPS

45.1

-0.2

2.1

63.9

40.9

Associated Gene:

Gene:

PMS2

Ensembl Gene ID:

ENSAPLG00000004599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004757

7353225 - 7366237

13013