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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7357393_7358610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7357393 - 7358610

Intron Length:

1218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGATAC

5'SS Class:

major

3'SS Sequence:

CTGGCTTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAATCTTGAAAT

Flanking Amino Acid:

NVNQKLLDITGNLKKTLPEE

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

68.2

33.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

67.2

0.39

66.5

39.4

Minor 5ss

31.4

-2.1

3.3

40.3

46.1

Minor BPS

58.2

0.33

1.5

71.26

38.8

Associated Gene:

Gene:

PMS2

Ensembl Gene ID:

ENSAPLG00000004599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004757

7353225 - 7366237

13013