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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7361955_7362506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7361955 - 7362506

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

TTTTCTTTAATA

Flanking Amino Acid:

HKEFQRNIKKEYAKMVQILQ

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

80.2

30.6

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

83.4

0.75

0.8

81.5

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

1.19

0.8

91.01

22.8

Associated Gene:

Gene:

PMS2

Ensembl Gene ID:

ENSAPLG00000004599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004757

7353225 - 7366237

13013

ENSAPLT00000040101

7360579 - 7366123

5545