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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7364656_7365164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7364656 - 7365164

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GTCAAATTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TATTTGTCAAAT

Flanking Amino Acid:

NSLDAGATNIDIKLKDHGTE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.2

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

66.1

0.36

58.7

41.7

Minor 5ss

33.1

-1.9

3.2

43.9

43.7

Minor BPS

48.8

-0

2.3

74.5

41.9

Associated Gene:

Gene:

PMS2

Ensembl Gene ID:

ENSAPLG00000004599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004757

7353225 - 7366237

13013

ENSAPLT00000040101

7360579 - 7366123

5545