Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7366027_7368471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7366027 - 7368471

Intron Length:

2445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCG

5'SS Class:

major

3'SS Sequence:

GCTTTCCATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ATCTGCTGATTT

Flanking Amino Acid:

CLHRAAPPAQDYGALKDIVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

63.4

41.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

77.1

0.61

0.9

74.2

35.6

Minor 5ss

29.4

-2.4

3.5

38.7

46.6

Minor BPS

46.9

-0.1

2.1

66.83

44.3

Associated Gene:

Gene:

AIMP2

Ensembl Gene ID:

ENSAPLG00000004525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045632

7365910 - 7369610

3701