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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7370175_7370651_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7370175 - 7370651

Intron Length:
477

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTAAGTTAT

5'SS Class:
strong_major

3'SS Sequence:
CTCTTACTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATAAAT

U12 Branch Point Sequence:
ATGACCTAAACT

Flanking Amino Acid:
ESELFHTTEHVIYNLQQKLR

Intron Amino Acid Position:
606

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.1
0.85
0.9
86.1
24.7

Major BPS
74.5
0.61
1
79.6
29.1

Major PPT
83.9
0.76
0.8
81.1
29.7

Minor 5ss
44.3
-0.6
2.9
62.8
42

Minor BPS
64.7
0.54
1.7
79.18
42.8

Associated Gene:

Gene:
EIF2AK1

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7370052 - 7387116
17065