Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7371469_7371591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7371469 - 7371591

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGACTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

TAAGTCTAAACT

Flanking Amino Acid:

DQWFHTEQINGLTHTSGVGT

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

70.3

0.46

1.1

70.6

38.9

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

57.4

0.31

1.8

73.36

43.4

Associated Gene:

Gene:

EIF2AK1

Ensembl Gene ID:

ENSAPLG00000004173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004324

7370052 - 7387116

17065