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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7386538_7386995_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7386538 - 7386995

Intron Length:
458

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGCGGG

5'SS Class:
major

3'SS Sequence:
TTTCCTTTTCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTAAA

U12 Branch Point Sequence:
CAGTTCTAAATT

Flanking Amino Acid:
PEESLEPRFDESDVPAELRV

Intron Amino Acid Position:
41

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.2
0.64
1.1
58.3
46.6

Major BPS
85.3
0.88
0.8
84.2
21.8

Major PPT
91.4
0.93
0.6
84.4
30.5

Minor 5ss
36.2
-1.6
3.4
47.3
48.1

Minor BPS
56.1
0.27
1.7
67.88
43.8

Associated Gene:

Gene:
EIF2AK1

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7370052 - 7387116
17065