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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7388055_7392891_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7388055 - 7392891

Intron Length:

4837

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCAGGGCGC

5'SS Class:

major

3'SS Sequence:

AACAAACACAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTGTATGGATT

Flanking Amino Acid:

GSRRGWDPRAGVGVGLYNLG

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

61.4

39.9

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

45.4

-0.2

1.1

34.8

33.1

Minor 5ss

18.9

-3.6

23.5

37.6

Minor BPS

48.1

-0

1.8

72.12

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024550

7387642 - 7394542

6901