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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7393011_7394164_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7393011 - 7394164

Intron Length:

1154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCACTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TCTTCTTTCACT

Flanking Amino Acid:

YMLSLEHNQSCREQGFCMMC

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

82.6

29.4

Major BPS

77.7

0.69

30.2

Major PPT

84.5

0.78

0.8

81.6

Minor 5ss

35.4

-1.7

2.9

48.5

40.3

Minor BPS

72.5

0.79

1.7

87.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043922

7391848 - 7394542

2695

ENSAPLT00000024550

7387642 - 7394542

6901