Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7503321_7507316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7503321 - 7507316

Intron Length:

3996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGAACT

5'SS Class:

major

3'SS Sequence:

ACTTGTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CTTCTGCTAACT

Flanking Amino Acid:

RLRPLSYPQTDVFLICFSLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

72.2

37.3

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

78.6

0.64

0.8

73.4

36.5

Minor 5ss

38.3

-1.3

3.1

56.8

Minor BPS

47.8

-0

2.3

73.51

43.3

Associated Gene:

Gene:

RAC1

Ensembl Gene ID:

ENSAPLG00000003568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003645

7495493 - 7509161

13669