About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7516774_7517749_R

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
7516774 - 7517749
Intron Length:
976

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTAGGTTGG
5'SS Class:
major
3'SS Sequence:
CTGTGTTTGTTAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTGAC
U12 Branch Point Sequence:
TTGACCATGAAA
Flanking Amino Acid:
FTALCKLNGDCCGSRPTDSD
Intron Amino Acid Position:
112

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
76.3
0.62
1.1
62.4
44.7
Major BPS
77.7
0.69
0.9
69.1
37.9
Major PPT
68.9
0.43
1
69.2
41.8
Minor 5ss
38.3
-1.3
3.1
45.9
44.6
Minor BPS
50.1
-0
1.8
65.61
40.3

Associated Gene:

Gene:
DAGLB
Ensembl Gene ID:
ENSAPLG00000003340
Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000003435
7511785 - 7520166
8382