Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7527324_7530322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7527324 - 7530322

Intron Length:

2999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGTAT

5'SS Class:

major

3'SS Sequence:

CCTTAATCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CTTTCCTTAATC

Flanking Amino Acid:

FISLYNTSMKLIYIACSYAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

38.3

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

73.5

0.53

0.8

70.4

34.9

Minor 5ss

36.4

-1.5

3.7

54.5

49.7

Minor BPS

85.8

1.1

86.11

32.2

Associated Gene:

Gene:

KDELR2

Ensembl Gene ID:

ENSAPLG00000002978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003025

7525121 - 7536615

11495