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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7564940_7565380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7564940 - 7565380

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTGCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

LRGFQAEVQKLKSQLLNIAM

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.1

30.9

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

75.4

0.57

0.9

73.8

36.9

Minor 5ss

30.6

-2.2

41.1

45.5

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

OTOA

Ensembl Gene ID:

ENSAPLG00000004657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004791

7541365 - 7572441

31077