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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7568641_7570360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7568641 - 7570360

Intron Length:

1720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTCAATGAATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTGTACAAAACA

Flanking Amino Acid:

EILQKSYNTSASWVSAENLW

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.4

31.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

61.1

0.25

1.1

59.4

44.9

Minor 5ss

48.1

-0.2

2.5

63.2

43.8

Minor BPS

49.4

-0

2.1

69.34

42.7

Associated Gene:

Gene:

OTOA

Ensembl Gene ID:

ENSAPLG00000004657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004791

7541365 - 7572441

31077