Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7619550_7620298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7619550 - 7620298

Intron Length:

749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTAC

5'SS Class:

major

3'SS Sequence:

TTGTTTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TGTTTCTTGCTT

Flanking Amino Acid:

ISEVAFHQAQVVFMIWNAIN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

64.6

35.9

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

76.9

0.6

0.9

69.5

41.6

Minor 5ss

43.2

-0.7

3.1

58.4

46.5

Minor BPS

46.8

-0.1

3.4

78.89

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004675

7606911 - 7622726

15816