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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7620446_7622714_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7620446 - 7622714

Intron Length:

2269

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCCTGGTTG

5'SS Class:

major

3'SS Sequence:

TTGGAAGATGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

ATTCGTACAATT

Flanking Amino Acid:

MTLEFVLGIQPNAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

49.2

-0

1.2

46.4

44.2

Minor 5ss

31.5

-2.1

4.1

46.4

Minor BPS

43.6

-0.4

2.1

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004675

7606911 - 7622726

15816