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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7638713_7640922_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7638713 - 7640922

Intron Length:

2210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGCTGATGGACT

Flanking Amino Acid:

NKQEVDRVLKDCCVSYGGMW

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.7

1.12

0.6

91.3

19.2

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

81.1

0.7

73.3

31.6

Minor 5ss

44.8

-0.6

2.8

61.1

43.8

Minor BPS

45.2

-0.2

2.2

65.96

44.4

Associated Gene:

Gene:

POLR3E

Ensembl Gene ID:

ENSAPLG00000003834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003981

7638656 - 7660937

22282