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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7647036_7648545_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7647036 - 7648545

Intron Length:

1510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTCGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTGTGGTGAGTT

Flanking Amino Acid:

LTPKKQETQSGHPLVVSGEQ

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.8

35.6

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

71.4

0.48

66.4

40.7

Minor 5ss

31.4

-2.1

3.2

40.8

45.4

Minor BPS

-0.6

2.5

64.28

46.5

Associated Gene:

Gene:

POLR3E

Ensembl Gene ID:

ENSAPLG00000003834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003981

7638656 - 7660937

22282