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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7649066_7649856_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7649066 - 7649856

Intron Length:

791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TTTTTCTTATAG

Flanking Amino Acid:

VRKEVAAVTKLCPEDVKDFL

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

74.7

28.6

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

88.3

0.86

0.6

84.2

23.9

Minor 5ss

29.2

-2.4

3.1

34.7

35.4

Minor BPS

63.5

0.29

1.8

72.21

40.6

Associated Gene:

Gene:

POLR3E

Ensembl Gene ID:

ENSAPLG00000003834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003981

7638656 - 7660937

22282