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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7649917_7652311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7649917 - 7652311

Intron Length:

2395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TGTTTCCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

ATATAGCTACTA

Flanking Amino Acid:

EVLCRGRDFVMWKFTQGRWV

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

75.4

33.7

Major BPS

72.7

0.57

72.1

31.1

Major PPT

83.5

0.75

0.8

81.3

30.7

Minor 5ss

38.6

-1.3

2.7

49.8

40.3

Minor BPS

38.2

-0.9

2.4

52.24

39.7

Associated Gene:

Gene:

POLR3E

Ensembl Gene ID:

ENSAPLG00000003834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003981

7638656 - 7660937

22282