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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7655077_7655158_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7655077 - 7655158

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTTCGTAAGC

Flanking Amino Acid:

MLMPPSVEEENDKPVAPSNV

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

86.8

0.83

0.8

81.4

35.2

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

57.9

0.23

2.3

77.35

39.1

Associated Gene:

Gene:

POLR3E

Ensembl Gene ID:

ENSAPLG00000003834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003981

7638656 - 7660937

22282