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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7673525_7674181_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7673525 - 7674181

Intron Length:
657

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
CAG|GCAAGTCTG

5'SS Class:
strong_major

3'SS Sequence:
TTTCCTCTTCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ACTTGAT

U12 Branch Point Sequence:
GTCAACATGACT

Flanking Amino Acid:
FHLDKDPQRSGELYTEAAEA

Intron Amino Acid Position:
640

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.9
1.13
0.7
82.7
36.5

Major BPS
75
0.62
1
65.3
41.5

Major PPT
84.6
0.78
0.7
77.6
31.1

Minor 5ss
27.5
-2.6
3.9
40.4
45.7

Minor BPS
47.9
-0
1.9
67.21
42.9

Associated Gene:

Gene:
EEF2K

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7673415 - 7694317
20903