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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7715325_7717777_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7715325 - 7717777

Intron Length:

2453

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCCAGTTGA

5'SS Class:

weak_major

3'SS Sequence:

AAAAAAATATGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

AATGAAAAAAAT

Flanking Amino Acid:

TFQKRSQAVVTGGGGY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.4

53.9

Major BPS

0.1

59.7

32.6

Major PPT

40.9

-0.5

1.7

35.2

43.3

Minor 5ss

26.8

-2.7

3.7

37.6

40.9

Minor BPS

35.6

-1

2.1

52.45

41.3

Associated Gene:

Gene:

SDR42E2

Ensembl Gene ID:

ENSAPLG00000003241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003305

7707358 - 7717797

10440