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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7819238_7819584_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7819238 - 7819584

Intron Length:
347

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAT|GTAGGTATC

5'SS Class:
major

3'SS Sequence:
CTTTTTTCTCTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GTTTAAT

U12 Branch Point Sequence:
TTGTGTTTAATC

Flanking Amino Acid:
TYSVECLRDYIDTVMEYLLN

Intron Amino Acid Position:
103

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.6
0.63
1.1
78.2
36.4

Major BPS
81.8
0.79
1.1
84
34.5

Major PPT
87.3
0.84
0.6
81.3
30.8

Minor 5ss
41.3
-1
3.1
58.4
39.6

Minor BPS
64.9
0.45
1.7
73.46
38.5

Associated Gene:

Gene:
UQCRC2

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7813061 - 7821823
8763