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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7859595_7860131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7859595 - 7860131

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

ATTATCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATTAT

U12 Branch Point Sequence:

TTGCCTGCAATT

Flanking Amino Acid:

SKAVQNFSMSGDLSRMSYGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

64.6

0.36

1.1

55.7

39.9

Major PPT

80.7

0.69

0.8

74.4

35.7

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

47.1

-0.1

2.1

69.17

42.4

Associated Gene:

Gene:

MCHR1

Ensembl Gene ID:

ENSAPLG00000001475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001464

7858597 - 7860216

1620