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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7903657_7904843_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7903657 - 7904843

Intron Length:

1187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTATTTT

5'SS Class:

major

3'SS Sequence:

GTCACTGGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CTATGTTAAAGT

Flanking Amino Acid:

VPWFIGKIIQIYEMMLVRHG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

35.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

63.7

0.31

1.1

56.4

43.4

Minor 5ss

47.9

-0.2

2.6

67.6

43.4

Minor BPS

44.8

-0.3

2.3

63.57

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045306

7902557 - 7906617

4061