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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7922090_7922439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7922090 - 7922439

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTT

5'SS Class:

strong_major

3'SS Sequence:

AAATTCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGCTTTTTAAAA

Flanking Amino Acid:

IVPENTNDKFRLWLTSYPSE

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

78.9

35.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.61

0.9

70.3

40.1

Minor 5ss

-1.7

3.8

55.2

Minor BPS

64.2

0.44

1.4

68.55

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037199

7918678 - 7930913

12236

ENSAPLT00000025016

7916102 - 7928063

11962

ENSAPLT00000020769

7920000 - 7930913

10914