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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7922685_7923546_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7922685 - 7923546

Intron Length:

862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGAATTGAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

CTTTCCTGAATT

Flanking Amino Acid:

VQERRNFGPLGWNIPYEFNE

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

79.5

36.8

Major BPS

69.6

0.49

59.5

Major PPT

59.3

0.21

1.1

44.4

Minor 5ss

42.2

-0.9

3.4

56.2

Minor BPS

77.2

0.93

1.4

88.83

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037199

7918678 - 7930913

12236

ENSAPLT00000025016

7916102 - 7928063

11962

ENSAPLT00000020769

7920000 - 7930913

10914