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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7927985_7928563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7927985 - 7928563

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATCT

Flanking Amino Acid:

VLRQELIRFNRLTEVVRSSL

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

75.6

34.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.9

0.65

80.5

30.7

Minor 5ss

47.4

-0.3

3.1

66.9

44.7

Minor BPS

68.3

0.65

1.5

82.72

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037199

7918678 - 7930913

12236

ENSAPLT00000020769

7920000 - 7930913

10914