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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8000023_8000750_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8000023 - 8000750

Intron Length:
728

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATGGATA

5'SS Class:
strong_major

3'SS Sequence:
CTTGTGTTACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAA

U12 Branch Point Sequence:
AGATTGTGAATC

Flanking Amino Acid:
SYGIGFTVNARYWLDLTHSD

Intron Amino Acid Position:
256

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.6
0.82
0.9
80.5
33.7

Major BPS
72.1
0.55
1.2
63.4
44.3

Major PPT
73.4
0.53
1
66
44.2

Minor 5ss
41.9
-0.9
3.1
56.7
47.6

Minor BPS
45.8
-0.3
2.1
54.93
37

Associated Gene:

Gene:
ACSM3

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7994978 - 8003830
8853

7994978 - 8003836
8859