Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_8015386_8015778_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8015386 - 8015778

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCAC

5'SS Class:

major

3'SS Sequence:

TCTGTCTATGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTTCCTCTGATA

Flanking Amino Acid:

YRMLVQHDLTRYTFKTLKHC

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.2

63.4

43.1

Major BPS

0.72

38.9

Major PPT

67.1

0.39

1.1

68.2

36.9

Minor 5ss

-1.2

3.1

52.9

44.2

Minor BPS

57.4

0.23

1.6

72.45

32.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035513

8012056 - 8022203

10148

ENSAPLT00000015727

8012056 - 8021754

9699

ENSAPLT00000047832

8012056 - 8022719

10664