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Intron Name: Anas_platyrhynchos_platyrhynchos_15_802791_807405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

802791 - 807405

Intron Length:

4615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATGAAT

U12 Branch Point Sequence:

ACTCCATGAATG

Flanking Amino Acid:

SKEAVAICKGLMTKHPAKRL

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.1

37.9

Major BPS

54.5

0.11

1.4

65.3

38.6

Major PPT

81.6

0.71

0.7

77.1

24.9

Minor 5ss

31.4

-2.1

3.6

39.6

45.9

Minor BPS

48.2

-0.2

1.8

53.66

41.1

Associated Gene:

Gene:

PRKCB

Ensembl Gene ID:

ENSAPLG00000008998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036133

793533 - 903744

110212

ENSAPLT00000009388

788846 - 903744

114899