Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_8038226_8038724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8038226 - 8038724

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACATCTA

5'SS Class:

major

3'SS Sequence:

TTTTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAATCTTTATTT

Flanking Amino Acid:

IHEVYGQTETGIICSVFKGM

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

62.8

43.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.8

0.99

0.6

92.5

25.7

Minor 5ss

36.6

-1.5

3.3

49.6

46.6

Minor BPS

60.9

0.42

1.5

72.35

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036496

8034670 - 8045195

10526

ENSAPLT00000015583

8034670 - 8043632

8963