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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8040483_8041260_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8040483 - 8041260

Intron Length:
778

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGAGCC

5'SS Class:
major

3'SS Sequence:
CTCCTGTGTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTACCAT

U12 Branch Point Sequence:
GTTACCATAACC

Flanking Amino Acid:
FRPLLSERYERYWLDLTPSD

Intron Amino Acid Position:
257

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.7
0.46
1.2
60.7
36.4

Major BPS
65.6
0.39
1.3
75.1
39.4

Major PPT
70
0.45
0.9
68.4
37.4

Minor 5ss
34.1
-1.8
3.1
43.3
43.9

Minor BPS
67.4
0.53
1.7
77.59
37.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8034670 - 8043632
8963