Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_8052519_8055672_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8052519 - 8055672

Intron Length:

3154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TTGCTCTCAGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TCAGCGAAAATT

Flanking Amino Acid:

DGWLNLKELFVEGYVLKHEN

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

69.7

36.3

Major BPS

77.9

0.69

0.8

75.9

Major PPT

0.29

1.1

65.5

35.1

Minor 5ss

32.6

-2

2.7

35.6

40.5

Minor BPS

39.2

-0.7

2.4

56.86

46.1

Associated Gene:

Gene:

ACSM5

Ensembl Gene ID:

ENSAPLG00000014585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031680

8052485 - 8057875

5391