Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_8060744_8071220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8060744 - 8071220

Intron Length:

10477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

TGACCCTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

TTTTGTTTGACC

Flanking Amino Acid:

KETKYLLVEFYVSLPQASQN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

74.7

35.4

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

75.2

0.57

0.9

65.6

40.7

Minor 5ss

37.8

-1.4

55.7

41.6

Minor BPS

68.8

0.58

1.7

81.35

33.5

Associated Gene:

Gene:

PDILT

Ensembl Gene ID:

ENSAPLG00000013853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028753

8055799 - 8084520

28722

ENSAPLT00000014454

8055695 - 8084520

28826