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Intron Name: Anas_platyrhynchos_platyrhynchos_15_812938_816531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

812938 - 816531

Intron Length:

3594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTTTTTTTTTTA

Flanking Amino Acid:

TQLHSCFQTMDRLYFVMEYV

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

42.8

-0.5

3.5

69.82

37.7

Associated Gene:

Gene:

PRKCB

Ensembl Gene ID:

ENSAPLG00000008998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036133

793533 - 903744

110212

ENSAPLT00000009388

788846 - 903744

114899