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Intron Name: Anas_platyrhynchos_platyrhynchos_15_822458_828311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

822458 - 828311

Intron Length:

5854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAATTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTCTCCATCT

Flanking Amino Acid:

GNEELRQKFERAKIGTGSKA

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

68.2

39.6

Major BPS

0.65

1.5

85.7

34.9

Major PPT

80.2

0.68

0.8

73.8

31.3

Minor 5ss

33.5

-1.9

2.9

40.6

45.6

Minor BPS

51.2

0.12

2.1

80.99

40.7

Associated Gene:

Gene:

PRKCB

Ensembl Gene ID:

ENSAPLG00000008998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036133

793533 - 903744

110212

ENSAPLT00000009388

788846 - 903744

114899