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Intron Name: Anas_platyrhynchos_platyrhynchos_15_828409_830072_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

828409 - 830072

Intron Length:

1664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CCTGCCCTGACC

Flanking Amino Acid:

SELQKSGVDGWFKLLSQEEG

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

75.2

40.6

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

79.6

0.67

0.8

70.3

36.3

Minor 5ss

-1.6

3.3

45.6

43.8

Minor BPS

51.6

0.03

1.8

62.16

43.8

Associated Gene:

Gene:

PRKCB

Ensembl Gene ID:

ENSAPLG00000008998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036133

793533 - 903744

110212

ENSAPLT00000009388

788846 - 903744

114899