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Intron Name: Anas_platyrhynchos_platyrhynchos_15_830208_830588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

830208 - 830588

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TCCTCCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

CTTCCAAAACCA

Flanking Amino Acid:

LNPEWNETFKFQLKEADKDR

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

75.4

33.7

Major BPS

62.7

0.32

1.2

33.2

Major PPT

81.7

0.71

0.7

72.9

Minor 5ss

38.6

-1.3

2.7

49.8

40.3

Minor BPS

39.5

-0.8

2.2

54.79

43.6

Associated Gene:

Gene:

PRKCB

Ensembl Gene ID:

ENSAPLG00000008998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036133

793533 - 903744

110212

ENSAPLT00000009388

788846 - 903744

114899