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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8347816_8348618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8347816 - 8348618

Intron Length:

803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTCTG

5'SS Class:

major

3'SS Sequence:

TTATTTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTACTT

Flanking Amino Acid:

HSRKTAAFVRACVAFCFITI

Intron Amino Acid Position:

720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.6

48.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.1

0.66

0.9

78.1

36.2

Minor 5ss

-1.6

3.2

45.3

Minor BPS

62.1

0.46

1.8

84.39

36.6

Associated Gene:

Gene:

VPS35L

Ensembl Gene ID:

ENSAPLG00000013151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024949

8325703 - 8373969

48267

ENSAPLT00000013785

8325703 - 8380787

55085