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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8348697_8349550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8348697 - 8349550

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGCTAC

5'SS Class:

major

3'SS Sequence:

TGTGCGTGTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTTTTGTATGT

Flanking Amino Acid:

LEPVLVQLIHSVNQLAMETR

Intron Amino Acid Position:

694

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

71.4

35.2

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.32

43.1

Minor 5ss

46.6

-0.4

2.9

63.4

41.6

Minor BPS

46.4

-0.1

2.4

74.38

43.4

Associated Gene:

Gene:

VPS35L

Ensembl Gene ID:

ENSAPLG00000013151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013785

8325703 - 8380787

55085

ENSAPLT00000024949

8325703 - 8373969

48267