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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8356112_8357112_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8356112 - 8357112

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTACTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

CTAATTTTACTT

Flanking Amino Acid:

IYDFSLLFSVEKFLPFLDMF

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

77.9

0.69

0.8

75.9

Major PPT

83.3

0.75

0.9

74.4

40.4

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

49.4

0.03

1.6

64.2

41.1

Associated Gene:

Gene:

VPS35L

Ensembl Gene ID:

ENSAPLG00000013151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024949

8325703 - 8373969

48267

ENSAPLT00000013785

8325703 - 8380787

55085

ENSAPLT00000040188

8325703 - 8380787

55085