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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8357176_8357995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8357176 - 8357995

Intron Length:

820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

ATTACAATCATT

Flanking Amino Acid:

DRAFEDAYPQLQSIIQKVIT

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

75.4

34.2

Major BPS

64.7

0.37

31.5

Major PPT

0.97

0.5

16.2

Minor 5ss

31.9

-2.1

3.2

42.1

Minor BPS

44.8

-0.3

2.2

69.57

41.1

Associated Gene:

Gene:

VPS35L

Ensembl Gene ID:

ENSAPLG00000013151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040188

8325703 - 8380787

55085

ENSAPLT00000024949

8325703 - 8373969

48267

ENSAPLT00000013785

8325703 - 8380787

55085